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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs13383896 chr2:201953336 G/A 0.000142 485 16.13 16.07 4.33 KM Plot
THCA rs13384245 chr2:201760937 A/C 0.000101 490 16.07 16.07 4.33 KM Plot
THCA rs13387751 chr2:55227375 C/G 0.000186 483 13.23 15.3 17.88 KM Plot
THCA rs13389349 chr2:201920618 T/C 0.000137 487 16.07 16.3 4.33 KM Plot
THCA rs13392348 chr2:42744783 C/T 4.8E-5 474 14.93 16.92 32.1 KM Plot
THCA rs13392371 chr2:201816421 T/A 0.000101 489 16.07 16.33 4.72 KM Plot
THCA rs13409926 chr2:29027095 A/G 0.000158 489 15.33 17.93 14.3 KM Plot
THCA rs13413479 chr2:202012578 G/A 0.000235 490 16.2 15.52 5.8 KM Plot
THCA rs1341759 chr6:26195502 G/A 2.21E-8 490 15.63 16.8 4.75 KM Plot
THCA rs13422568 chr2:201939390 G/A 0.000137 488 16.07 16.07 4.33 KM Plot
THCA rs1348903 chr2:167386717 T/C 0.000238 481 16.98 15.17 13.8 KM Plot
THCA rs135819 chr22:49955490 T/C 5.17E-6 471 11.8 15.08 16.57 KM Plot
THCA rs137878230 chr19:43565246 A/G 0.000237 488 15.32 18.93 10.08 KM Plot
THCA rs137987579 chr3:127638628 AAT/A 0 489 16.23 15 6.03 KM Plot
THCA rs138077185 chr1:224368032 TTTTC/T 0.000108 480 16.63 15.17 12.43 KM Plot